Software

An R package for comprehensive C-QT analysis, from data to deliverables.

A Rust-based CLI and R package that versions large or sensitive data files alongside code, storing their contents outside the repository while lightweight metadata stays tracked in Git.

A CLI and web app that improves collaboration, standardization, and traceability of the QC process via GitHub

hyperion brings pharos to R. Run, track, and trace NONMEM models from your R session, with every run’s lineage recorded automatically instead of pieced together by hand.

A companion R package to hyperion that builds tables ready for publication directly from NONMEM models.

A Rust-based CLI for running NONMEM that automatically fingerprints every dataset, input, and output, so each run can be traced and reproduced.

An R package for building and publishing packages to CRAN-like repositories, updating package indexes and archiving older builds.

A Shiny app that brings reportifyr’s traceable reporting to PowerPoint, building decks from R-generated figures and rebuilding them when figures change.

An R package that uses uv to manage project-local Python dependencies and virtual environments, with dependency declarations and a lock file that keep the environment reproducible.

A Quarto extension that adds tables of contents, lists of figures and tables, cross-references, and a glossary to Word documents rendered from Quarto.

An R package that builds traceable Word reports, inserting tables, listings, and figures with embedded metadata and replacing them when results change.

A Rust-based CLI for declarative R package management that resolves the full dependency tree of the configuration file’s declared dependencies before installation and records exactly how each package was installed, so environments across machines are reproducible over time.

An R package of shared function for calculations pharmacometric analyses need on every project, from renal function and body size to demographic coding and hash-verified data reads.

An R package for submitting, monitoring, and cancelling NONMEM jobs on a Slurm cluster, using customizable job templates and optional notifications when finished.

A Rust-based templating engine that generates new projects from a declarative config, usable from the command line, the browser, or any application built on it.

An R package that builds Astro Starlight documentation sites from package reference documentation, vignettes, and examples.